image: The PCA enabled the team to quantify the structural changes in dendrites and correlate these changes with Gibbs free energy. This relationship revealed the specific conditions and mechanisms that drive dendrite branching in thin films.
Credit: Masato Kotsugi from Tokyo University of Science, Japan Image source link: https://www.tandfonline.com/doi/full/10.1080/27660400.2025.2475735
Thin film devices, composed of layers of materials a few nanometers thick, play an important role in various technologies, from semiconductors to communication technologies. For instance, graphene and hexagonal-boron nitride (h-BN) multilayer thin films, deposited on copper substrates, are promising materials for next-generation high-speed communications systems. Thin films are grown by depositing tiny layers of materials onto a substrate. The growth process conditions significantly influence the microstructure of these films, which in turn influences their function and performance.
Dendritic structures, or tree-like branching patterns that emerge during growth, pose a major challenge to large-area fabrication of thin-film devices, a key step toward commercial application. They are commonly observed in materials like copper, graphene, and borophene, particularly in the early growth stage and multilayer films. Since the microstructure directly impacts device performance, reducing dendritic formation is, therefore, critical. However, methods for studying dendrites have largely relied on crude visual analysis and subjective interpretation. Understanding the conditions that drive dendritic branching is essential for optimizing the thin-film growth process, but existing approaches often require considerable trial and error.
To address these challenges, a research team, led by Professor Masato Kotsugi from the Department of Material Science and Technology at Tokyo University of Science (TUS), Japan, developed an innovative explainable artificial intelligence (AI) model for analyzing dendritic structures. The team included Misato Tone, also from TUS, and Ippei Obayashi from Okayama University. The team developed a novel method that bridges structure and process in dendritic growth by integrating persistent homology and machine learning with energy analysis. “Our approach provides new insights into growth mechanisms and offers a powerful, data-driven pathway for optimizing thin-film fabrication,” explains Prof. Kotsugi. Their study was published online in Science and Technology of Advanced Materials: Methods on March 7, 2025.
To analyze the morphology of dendrite structures, the team used a cutting-edge topology method called persistent homology (PH). PH enables multiscale analysis of holes and connections within geometric structures, capturing the complex topological features of the tree-like dendrite microstructures that conventional image processing techniques often overlook.
The researchers combined PH with principal component analysis (PCA), a machine learning technique. Through PCA, the essential features of the dendrite morphology extracted via PH were reduced to a two-dimensional space. This enabled the team to quantify structural changes in dendrites and establish a relationship between these changes and Gibbs free energy, or the energy available in a material that influences how dendrites form during crystal growth. By analyzing this relationship, they uncovered the specific conditions and hidden growth mechanisms that influence dendritic branching. Prof. Kotsugi explains, “Our framework quantitatively maps dendritic morphology to Gibbs free energy variations, revealing energy gradients that drive branching behavior.”
To validate their approach, the researchers studied dendrite growth in a hexagonal copper substrate and compared their results with data from phase-field simulations.
“By integrating topology and free energy, our method offers a versatile approach to material analysis. Through this integration, we can establish a hierarchical connection between atomic-scale microstructures and macroscopic functionalities across a wide range of materials, paving the way for future advancements in material science,” remarks Prof. Kotsugi. “Importantly, our method could lead to the development of high-quality thin-film devices leading to high-speed communication beyond 5G.”
This study’s framework could pave the way for breakthroughs in sensor technology, nonequilibrium physics, and high-performance materials by uncovering hidden structure-function relationships and advancing complex system analysis.
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Reference
Title of original paper: Linking structure and process in dendritic growth using persistent homology with energy analysis
Journal: Science and Technology of Advanced Materials: Methods
DOI: 10.1080/27660400.2025.2475735
About The Tokyo University of Science
Tokyo University of Science (TUS) is a well-known and respected university, and the largest science-specialized private research university in Japan, with four campuses in central Tokyo and its suburbs and in Hokkaido. Established in 1881, the university has continually contributed to Japan's development in science through inculcating the love for science in researchers, technicians, and educators.
With a mission of “Creating science and technology for the harmonious development of nature, human beings, and society," TUS has undertaken a wide range of research from basic to applied science. TUS has embraced a multidisciplinary approach to research and undertaken intensive study in some of today's most vital fields. TUS is a meritocracy where the best in science is recognized and nurtured. It is the only private university in Japan that has produced a Nobel Prize winner and the only private university in Asia to produce Nobel Prize winners within the natural sciences field.
Website: https://www.tus.ac.jp/en/mediarelations/
About Professor Masato Kotsugi from Tokyo University of Science
Professor Masato Kotsugi graduated from Sophia University, Japan, in 1996 and subsequently received his Ph.D. from the Graduate School of Engineering Science at Osaka University, Japan, in 2001. He joined Tokyo University of Science in 2015 as a lecturer and is now a Professor at the Faculty of Advanced Engineering, Department of Materials Science and Technology. Prof. Kotsugi and his students conduct cutting-edge research on high-performance materials to create a green-energy society. He has published over 130 peer-reviewed papers and is currently interested in solid-state physics, magnetism, synchrotron radiation, and materials informatics.
Funding information
This work was supported by the Japan Science and Technology Agency (JST) CREST (Grant No. JPMJCR21O4). This work was partially supported by the Japan Society for the Promotion of Science (KAKENHI) Grant-in-Aid for Scientific Research (A) (21H04656), Grant-in-Aid for Challenging Research (Exploratory) (19K22117) and Beyond 5G Research and Development Project (grant number:05901), and JST-Mirai Program (grant number: JPMJMI22708192).
Journal
Science and Technology of Advanced Materials Methods
Method of Research
Experimental study
Subject of Research
Not applicable
Article Title
Linking structure and process in dendritic growth using persistent homology with energy analysis
Article Publication Date
7-Mar-2025
COI Statement
The authors declare that there are no conflicts of interest regarding the publication of this paper. No competing financial or non-financial interests are involved in the research, authorship, and publication of this work.