Genomic characteristics of P. ludlowii and sequence variations between tree peony genomes. (IMAGE)

Nanjing Agricultural University The Academy of Science

Genomic characteristics of P. ludlowii and sequence variations between tree peony genomes.

Caption

Genomic characteristics of P. ludlowii and sequence variations between tree peony genomes. A Tracks of the Circos plot indicate the overall characteristics of the P. ludlowii genome with a sliding window of 10 Mb. (Track a) Chromosome ideogram; tracks b–f, density of genes, TEs, Gypsy, Copia, and DNA transposons. (Tracks g–i) Density of DNA methylation levels in CG, CHG, and CHH contexts. B Dot plot of sequence alignments between P. ludlowii and P. ostii. C SNPs and indels in different genomic regions between P. ludlowii and P. ostii. D Example of inversion between P. ludlowii and P. ostii. E Percentage of P. ostii or P. ludlowii genes that could be aligned to the P. ludlowii or P. ostii genome with different cutoff values of sequence identity. Pl, P. ludlowii; Po, P. ostii.

Credit

Horticulture Research

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